PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS72657.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 70aa    MW: 8058.57 Da    PI: 8.7706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS72657.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-082411255
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  EPS72657.1  2 RREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 41
                9*****************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.792140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.4E-4146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.18E-6245No hitNo description
PfamPF000101.5E-5241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-14260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-15359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNARLNP  60
MTDCFLPKEV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417467.12e-37hypothetical protein EUTSA_v10008474mg
SwissprotQ0JXE75e-38BPE_ARATH; Transcription factor BPE
TrEMBLS8EJ548e-45S8EJ54_9LAMI; Uncharacterized protein (Fragment)
STRINGBra019935.1-P7e-36(Brassica rapa)
STRINGscaffold_200689.17e-36(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-39BIG PETAL P
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]